If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 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'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ), 'gf_id' => 'HOM05D000547', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000547' ), 'data_identifier' => 'HOM05D000547', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000547', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1000', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20980' => 'bna', 'A02p20990' => 'bna', 'A02p31490' => 'bna', 'A02p38430' => 'bna', 'A03p01330' => 'bna', 'A06p37880' => 'bna', 'A06p44880' => 'bna', 'A07p28280' => 'bna', 'A07p28290' => 'bna', 'A07p42460' => 'bna', 'A07p42480' => 'bna', 'A08p08640' => 'bna', 'A09p33070' => 'bna', 'A10p32420' => 'bna', 'Aa31LG11G8740' => 'aar', 'Aa31LG1G21540' => 'aar', 'Aa31LG4G6920' => 'aar', 'Aa31LG4G6930' => 'aar', 'Aa31LG6G7740' => 'aar', 'Aa31LG9G11630' => 'aar', 'Aa31sc662G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1311' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.529' => 'aag', 'Actinidia04763' => 'ach', 'Actinidia05452' => 'ach', 'Actinidia05769' => 'ach', 'Actinidia06669' => 'ach', 'Actinidia08431' => 'ach', 'Actinidia10648' => 'ach', 'Actinidia11904' => 'ach', 'Actinidia12741' => 'ach', 'Actinidia12742' => 'ach', 'Actinidia17796' => 'ach', 'Actinidia25395' => 'ach', 'Actinidia29527' => 'ach', 'Actinidia30935' => 'ach', 'Actinidia39256' => 'ach', 'Ah.02g122440' => 'amhyb', 'Ah.05g167960' => 'amhyb', 'Ah.06g192200' => 'amhyb', 'Ah.09g233890' => 'amhyb', 'AL1G47610' => 'aly', 'AL2G37000' => 'aly', 'AL2G37010' => 'aly', 'AL3G21290' => 'aly', 'AL6G13190' => 'aly', 'AL6G40500' => 'aly', 'AL8G10290' => 'aly', 'Aqoxy1G01611' => 'aox', 'Aqoxy2G03445' => 'aox', 'Aqoxy4G02288' => 'aox', 'Aqoxy4G02882' => 'aox', 'Aqoxy5G02096' => 'aox', 'Aqoxy5G04402' => 'aox', 'arahy.Tifrunner.gnm1.ann1.076XKT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0CU6GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.192FJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.22G7N5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.23B9T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2968RG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4F3XVH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69G02P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6ZR463' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.708L2Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.89A9VD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9T2CEP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FP0NYE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IGA88J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J58VLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K09AJ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K6EU4R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8RR3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TBD9DX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TU7PE1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UGYE5Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WDZX9F' => 'arhy', 'AT1G33240' => 'ath', 'AT1G76880' => 'ath', 'AT1G76890' => 'ath', 'AT3G10000' => 'ath', 'AT5G03680' => 'ath', 'AT5G28300' => 'ath', 'AT5G47660' => 'ath', 'ATR0559G107' => 'atr', 'ATR0580G038' => 'atr', 'ATR0661G122' => 'atr', 'ATR0665G277' => 'atr', 'ATR0772G198' => 'atr', 'ATR0810G068' => 'atr', 'ATR0820G204' => 'atr', 'ATR0820G256' => 'atr', 'Atru.chr1.2260' => 'acertr', 'Atru.chr12.971' => 'acertr', 'Atru.chr13.2130' => 'acertr', 'Atru.chr13.2131' => 'acertr', 'Atru.chr2.789' => 'acertr', 'Atru.chr2.790' => 'acertr', 'Atru.chr4.543' => 'acertr', 'Atru.chr7.1851' => 'acertr', 'Atru.chr8.1626' => 'acertr', 'Atru.chr9.2607' => 'acertr', 'AUR62001029' => 'cqu', 'AUR62003625' => 'cqu', 'AUR62004923' => 'cqu', 'AUR62012844' => 'cqu', 'AUR62013581' => 'cqu', 'AUR62017934' => 'cqu', 'AUR62021815' => 'cqu', 'AUR62026710' => 'cqu', 'AUR62033561' => 'cqu', 'AUR62041433' => 'cqu', 'AUR62044651' => 'cqu', 'AUR62044654' => 'cqu', 'AUR62044655' => 'cqu', 'BcaB01g05794' => 'bca', 'BcaB01g05808' => 'bca', 'BcaB02g07080' => 'bca', 'BcaB02g07081' => 'bca', 'BcaB04g17922' => 'bca', 'BcaB05g21819' => 'bca', 'BcaB05g25015' => 'bca', 'BcaB05g25016' => 'bca', 'BcaB07g34183' => 'bca', 'BcaC03g12992' => 'bca', 'BcaC03g13125' => 'bca', 'BcaC03g13126' => 'bca', 'BcaC03g15713' => 'bca', 'BcaC03g15714' => 'bca', 'BcaC03g16982' => 'bca', 'BcaC03g17762' => 'bca', 'BcaC06g31352' => 'bca', 'BcaC06g32077' => 'bca', 'BcaC06g34234' => 'bca', 'BcaC07g37562' => 'bca', 'BcaC08g43885' => 'bca', 'BcaC08g45503' => 'bca', 'BcaC08g45505' => 'bca', 'BcaC08g47187' => 'bca', 'BcaC08g47189' => 'bca', 'BcaNung01731' => 'bca', 'BcaNung02090' => 'bca', 'BolC2t06109H' => 'bol', 'BolC2t06166H' => 'bol', 'BolC2t06169H' => 'bol', 'BolC2t06170H' => 'bol', 'BolC2t09435H' => 'bol', 'BolC2t09436H' => 'bol', 'BolC2t11848H' => 'bol', 'BolC3t12721H' => 'bol', 'BolC6t36427H' => 'bol', 'BolC6t38303H' => 'bol', 'BolC6t38304H' => 'bol', 'BolC6t40127H' => 'bol', 'BolC6t40128H' => 'bol', 'BolC7t44570H' => 'bol', 'BolC8t47905H' => 'bol', 'BolC9t60059H' => 'bol', 'BraA02t04777Z' => 'bra', 'BraA02t07127Z' => 'bra', 'BraA02t08152Z' => 'bra', 'BraA02t08822Z' => 'bra', 'BraA03t09513Z' => 'bra', 'BraA06t26706Z' => 'bra', 'BraA06t27359Z' => 'bra', 'BraA07t30467Z' => 'bra', 'BraA07t30468Z' => 'bra', 'BraA07t31771Z' => 'bra', 'BraA07t31772Z' => 'bra', 'BraA08t32878Z' => 'bra', 'BraA09t38851Z' => 'bra', 'BraA10t45282Z' => 'bra', 'C02p01190' => 'bna', 'C02p34150' => 'bna', 'C02p34190' => 'bna', 'C02p48820' => 'bna', 'C02p57760' => 'bna', 'C03p01680' => 'bna', 'C06p12720' => 'bna', 'C06p31740' => 'bna', 'C06p31750' => 'bna', 'C06p51020' => 'bna', 'C06p51030' => 'bna', 'C07p40360' => 'bna', 'C09p73240' => 'bna', 'CAN.G1138.20' => 'can', 'CAN.G1156.16' => 'can', 'CAN.G249.13' => 'can', 'CAN.G26.46' => 'can', 'CAN.G268.12' => 'can', 'CAN.G824.13' => 'can', 'CANSAT01G1955' => 'cansat', 'CANSAT21G1782' => 'cansat', 'CANSAT25G2512' => 'cansat', 'CANSAT25G3336' => 'cansat', 'CANSAT54G0879' => 'cansat', 'CANSAT56G1632' => 'cansat', 'CANSAT56G4479' => 'cansat', 'CANSAT80G0790' => 'cansat', 'CARHR032600' => 'chi', 'CARHR070390' => 'chi', 'CARHR070400' => 'chi', 'CARHR084500' => 'chi', 'CARHR173650' => 'chi', 'CARHR185100' => 'chi', 'CARHR209620' => 'chi', 'Carub.0001s3143' => 'cru', 'Carub.0002s2375' => 'cru', 'Carub.0002s2376' => 'cru', 'Carub.0003s0910' => 'cru', 'Carub.0006s0259' => 'cru', 'Carub.0006s2570' => 'cru', 'Carub.0008s0012' => 'cru', 'Ca_00761_v3' => 'car', 'Ca_06091_v3' => 'car', 'Ca_08969_v3' => 'car', 'Ca_09412_v3' => 'car', 'Ca_10051_v3' => 'car', 'Ca_10494_v3' => 'car', 'Ca_10688_v3' => 'car', 'Ca_10689_v3' => 'car', 'Ca_11628_v3' => 'car', 'Ca_29857_v3' => 'car', 'CBR_g29899' => 'cbr', 'Cc02_g31850' => 'ccan', 'Cc06_g05330' => 'ccan', 'Cc07_g17350' => 'ccan', 'Cc08_g01240' => 'ccan', 'Cc10_g14770' => 'ccan', 'CDE02G1055' => 'cde', 'CDE04G1799' => 'cde', 'CDE04G1991' => 'cde', 'CDE08G0917' => 'cde', 'CDE09G0417' => 'cde', 'CDE11G1209' => 'cde', 'CDE12G0242' => 'cde', 'CDE12G0868' => 'cde', 'Cfa000038' => 'cfa', 'Cfa002870' => 'cfa', 'Cfa006451' => 'cfa', 'Cfa011227' => 'cfa', 'Cfa011872' => 'cfa', 'Cfa016539' => 'cfa', 'Cfa018322' => 'cfa', 'Cfa018324' => 'cfa', 'Ciclev10000454m.g' => 'ccl', 'Ciclev10000593m.g' => 'ccl', 'Ciclev10000627m.g' => 'ccl', 'Ciclev10010595m.g' => 'ccl', 'Ciclev10011338m.g' => 'ccl', 'Ciclev10015695m.g' => 'ccl', 'Ciclev10018915m.g' => 'ccl', 'Ciclev10025533m.g' => 'ccl', 'Ciclev10031295m.g' => 'ccl', 'CiPaw.03G123700' => 'cil', 'CiPaw.07G065000' => 'cil', 'CiPaw.08G125100' => 'cil', 'CiPaw.09G009200' => 'cil', 'CiPaw.10G005900' => 'cil', 'CiPaw.10G081700' => 'cil', 'CiPaw.11G105900' => 'cil', 'CiPaw.12G073600' => 'cil', 'CiPaw.13G036400' => 'cil', 'CiPaw.14G028700' => 'cil', 'CiPaw.15G016400' => 'cil', 'CiPaw.15G016500' => 'cil', 'CiPaw.16G012800' => 'cil', 'CiPaw.16G012900' => 'cil', 'ClCG01G001200' => 'cla', 'ClCG01G010720' => 'cla', 'ClCG02G000700' => 'cla', 'ClCG05G021590' => 'cla', 'ClCG06G009170' => 'cla', 'ClCG08G003510' => 'cla', 'ClCG08G003530' => 'cla', 'ClCG10G019270' => 'cla', 'COL.COLO4_15302' => 'col', 'COL.COLO4_20923' => 'col', 'COL.COLO4_21134' => 'col', 'COL.COLO4_22416' => 'col', 'COL.COLO4_29809' => 'col', 'COL.COLO4_31938' => 'col', 'COL.COLO4_33898' => 'col', 'COL.COLO4_37826' => 'col', 'COL.COLO4_37832' => 'col', 'Cpa.g.sc117.75' => 'cpa', 'Cpa.g.sc126.31' => 'cpa', 'Cpa.g.sc128.45' => 'cpa', 'Cpa.g.sc21.194' => 'cpa', 'Cpa.g.sc21.195' => 'cpa', 'Cpa.g.sc2611.1' => 'cpa', 'Cpa.g.sc27.230' => 'cpa', 'Cpa.g.sc37.120' => 'cpa', 'Cpa.g.sc5.72' => 'cpa', 'CsaV3_1G015790' => 'csa', 'CsaV3_1G045630' => 'csa', 'CsaV3_1G045640' => 'csa', 'CsaV3_2G018070' => 'csa', 'CsaV3_3G036920' => 'csa', 'CsaV3_5G001320' => 'csa', 'CsaV3_5G035640' => 'csa', 'CsaV3_6G004020' => 'csa', 'CsaV3_6G004030' => 'csa', 'CsaV3_UNG002050' => 'csa', 'CsaV3_UNG063490' => 'csa', 'CSS0006260' => 'camsi', 'CSS0017353' => 'camsi', 'CSS0017381' => 'camsi', 'CSS0019399' => 'camsi', 'CSS0022529' => 'camsi', 'CSS0025542' => 'camsi', 'CSS0038830' => 'camsi', 'CSS0040987' => 'camsi', 'CSS0041601' => 'camsi', 'CSS0043945' => 'camsi', 'CSS0046470' => 'camsi', 'CSS0048056' => 'camsi', 'CSS0048479' => 'camsi', 'DCAR_001133' => 'dca', 'DCAR_013364' => 'dca', 'DCAR_014348' => 'dca', 'DCAR_014433' => 'dca', 'DCAR_028374' => 'dca', 'DCAR_029723' => 'dca', 'DCAR_030968' => 'dca', 'Dinv01440' => 'din', 'Dinv09940' => 'din', 'Dinv10537' => 'din', 'Dinv15110' => 'din', 'Dinv15341' => 'din', 'Dinv17776' => 'din', 'Dinv17777' => 'din', 'Dinv19834' => 'din', 'Dinv20821' => 'din', 'Dinv21248' => 'din', 'Dinv25860' => 'din', 'Dinv30653' => 'din', 'Dinv41087' => 'din', 'Dinv42730' => 'din', 'Dinv43371' => 'din', 'Duzib041G0225' => 'dzi', 'Duzib041G0405' => 'dzi', 'Duzib068G0516' => 'dzi', 'Duzib084G1448' => 'dzi', 'Duzib093G1306' => 'dzi', 'Duzib093G1581' => 'dzi', 'Duzib106G0295' => 'dzi', 'Duzib106G1498' => 'dzi', 'Duzib106G1727' => 'dzi', 'Duzib116G0189' => 'dzi', 'Duzib116G0475' => 'dzi', 'Duzib128G0826' => 'dzi', 'Duzib128G1969' => 'dzi', 'Duzib147G1184' => 'dzi', 'Duzib150G1367' => 'dzi', 'Duzib160G0438' => 'dzi', 'Duzib168G2193' => 'dzi', 'Duzib177G0744' => 'dzi', 'Duzib192G0469' => 'dzi', 'Duzib205G1986' => 'dzi', 'ECA232G1858' => 'eca', 'ECA233G2613' => 'eca', 'ECA240G1583' => 'eca', 'ECA246G5227' => 'eca', 'ECA247G1244' => 'eca', 'ECA248G2929' => 'eca', 'EL10Ac1g01540' => 'bvu', 'EL10Ac4g09109' => 'bvu', 'EL10Ac4g09110' => 'bvu', 'EL10Ac6g15252' => 'bvu', 'EL10Ac7g16982' => 'bvu', 'EL10Ac8g20261' => 'bvu', 'Eucgr.D02541' => 'egr', 'Eucgr.F02707' => 'egr', 'Eucgr.F04239' => 'egr', 'Eucgr.H04383' => 'egr', 'Eucgr.J01012' => 'egr', 'Eucgr.K02072' => 'egr', 'Eucgr.L00152' => 'egr', 'FAN02G0026' => 'fan', 'FAN02G0308' => 'fan', 'FAN03G3256' => 'fan', 'FAN04G2367' => 'fan', 'FAN05G0366' => 'fan', 'FAN05G4528' => 'fan', 'FAN05G4738' => 'fan', 'FAN05G5125' => 'fan', 'FAN06G3179' => 'fan', 'FAN08G2780' => 'fan', 'FAN09G0013' => 'fan', 'FAN09G4443' => 'fan', 'FAN10G2220' => 'fan', 'FAN13G0248' => 'fan', 'FAN14G2297' => 'fan', 'FAN14G2789' => 'fan', 'FAN15G1823' => 'fan', 'FAN15G2749' => 'fan', 'FAN15G3145' => 'fan', 'FAN18G4016' => 'fan', 'FAN19G1528' => 'fan', 'FAN20G0041' => 'fan', 'FAN20G0585' => 'fan', 'FAN20G1118' => 'fan', 'FAN21G2750' => 'fan', 'FAN23G0984' => 'fan', 'FAN24G1162' => 'fan', 'FAN24G3141' => 'fan', 'FAN24G3489' => 'fan', 'FAN25G3544' => 'fan', 'FAN26G2790' => 'fan', 'FAN27G0373' => 'fan', 'FAN27G1836' => 'fan', 'FAN27G2535' => 'fan', 'FAN28G0492' => 'fan', 'FvH4_1g23600' => 'fve', 'FvH4_2g13840' => 'fve', 'FvH4_2g13850' => 'fve', 'FvH4_2g31050' => 'fve', 'FvH4_3g00330' => 'fve', 'FvH4_5g10140' => 'fve', 'FvH4_6g03310' => 'fve', 'FvH4_6g17990' => 'fve', 'FvH4_7g05970' => 'fve', 'Glyma.02G082000' => 'gma', 'Glyma.02G082100' => 'gma', 'Glyma.03G191700' => 'gma', 'Glyma.03G246000' => 'gma', 'Glyma.04G216100' => 'gma', 'Glyma.06G149900' => 'gma', 'Glyma.09G014300' => 'gma', 'Glyma.09G116400' => 'gma', 'Glyma.10G066800' => 'gma', 'Glyma.10G161200' => 'gma', 'Glyma.10G202300' => 'gma', 'Glyma.10G225102' => 'gma', 'Glyma.10G225200' => 'gma', 'Glyma.15G119000' => 'gma', 'Glyma.16G167500' => 'gma', 'Glyma.16G167600' => 'gma', 'Glyma.19G192300' => 'gma', 'Glyma.19G243500' => 'gma', 'Glyma.20G166600' => 'gma', 'Glyma.20G166800' => 'gma', 'Glyma.20G188100' => 'gma', 'Glyma.20G224000' => 'gma', 'Gohir.A01G139000' => 'ghi', 'Gohir.A01G197900' => 'ghi', 'Gohir.A01G208700' => 'ghi', 'Gohir.A02G094200' => 'ghi', 'Gohir.A05G243100' => 'ghi', 'Gohir.A05G243200' => 'ghi', 'Gohir.A05G288300' => 'ghi', 'Gohir.A06G082400' => 'ghi', 'Gohir.A06G203900' => 'ghi', 'Gohir.A07G019800' => 'ghi', 'Gohir.A11G253900' => 'ghi', 'Gohir.A12G079700' => 'ghi', 'Gohir.A12G243800' => 'ghi', 'Gohir.A13G011500' => 'ghi', 'Gohir.D01G128900' => 'ghi', 'Gohir.D01G188100' => 'ghi', 'Gohir.D01G197800' => 'ghi', 'Gohir.D03G089200' => 'ghi', 'Gohir.D05G244600' => 'ghi', 'Gohir.D05G244700' => 'ghi', 'Gohir.D05G289500' => 'ghi', 'Gohir.D06G083400' => 'ghi', 'Gohir.D06G217600' => 'ghi', 'Gohir.D07G019600' => 'ghi', 'Gohir.D11G263800' => 'ghi', 'Gohir.D12G092100' => 'ghi', 'Gohir.D12G244800' => 'ghi', 'Gohir.D13G012200' => 'ghi', 'Gorai.001G020300' => 'gra', 'Gorai.002G159600' => 'gra', 'Gorai.002G231500' => 'gra', 'Gorai.002G242000' => 'gra', 'Gorai.003G072300' => 'gra', 'Gorai.007G283800' => 'gra', 'Gorai.008G099700' => 'gra', 'Gorai.008G262400' => 'gra', 'Gorai.009G253700' => 'gra', 'Gorai.009G253900' => 'gra', 'Gorai.009G304600' => 'gra', 'Gorai.010G096900' => 'gra', 'Gorai.010G248600' => 'gra', 'Gorai.013G013400' => 'gra', 'GSVIVG01019722001' => 'vvi', 'GSVIVG01021832001' => 'vvi', 'GSVIVG01026588001' => 'vvi', 'GSVIVG01033792001' => 'vvi', 'GSVIVG01034523001' => 'vvi', 'GSVIVG01034705001' => 'vvi', 'GSVIVG01035465001' => 'vvi', 'HanXRQChr01g0028921' => 'han', 'HanXRQChr02g0040661' => 'han', 'HanXRQChr05g0161901' => 'han', 'HanXRQChr06g0167061' => 'han', 'HanXRQChr10g0279031' => 'han', 'HanXRQChr11g0351351' => 'han', 'HanXRQChr12g0382151' => 'han', 'HanXRQChr15g0491601' => 'han', 'HanXRQChr16g0515771' => 'han', 'Haze_02601' => 'cav', 'Haze_04341' => 'cav', 'Haze_07017' => 'cav', 'Haze_09236' => 'cav', 'Haze_17750' => 'cav', 'Haze_17751' => 'cav', 'Haze_19544' => 'cav', 'Haze_25198' => 'cav', 'Hma1.2p1_0083F.1_g042830' => 'hma', 'Hma1.2p1_0084F.1_g043320' => 'hma', 'Hma1.2p1_1175F.1_g264010' => 'hma', 'HPP92_001981' => 'vpl', 'HPP92_001982' => 'vpl', 'HPP92_002059' => 'vpl', 'HPP92_012643' => 'vpl', 'HPP92_022711' => 'vpl', 'HPP92_025410' => 'vpl', 'HPP92_025861' => 'vpl', 'Hund03481' => 'sun', 'Hund04073' => 'sun', 'Hund17431' => 'sun', 'Hund19281' => 'sun', 'Hund21134' => 'sun', 'Hund26697' => 'sun', 'Lalb_Chr02g0148721' => 'lal', 'Lalb_Chr02g0151381' => 'lal', 'Lalb_Chr02g0155191' => 'lal', 'Lalb_Chr03g0035301' => 'lal', 'Lalb_Chr06g0161581' => 'lal', 'Lalb_Chr06g0168011' => 'lal', 'Lalb_Chr06g0173321' => 'lal', 'Lalb_Chr06g0173331' => 'lal', 'Lalb_Chr11g0068251' => 'lal', 'Lalb_Chr18g0057281' => 'lal', 'Lalb_Chr19g0130281' => 'lal', 'Lalb_Chr19g0130291' => 'lal', 'Lalb_Chr20g0112171' => 'lal', 'Lalb_Chr20g0119521' => 'lal', 'Lalb_Chr21g0305451' => 'lal', 'Lalb_Chr21g0305471' => 'lal', 'Lalb_Chr21g0310931' => 'lal', 'Lalb_Chr21g0315631' => 'lal', 'Lalb_Chr25g0288621' => 'lal', 'Lj1g0010230' => 'lja', 'Lj1g0015081' => 'lja', 'Lj1g0020166' => 'lja', 'Lj2A130G47' => 'lonja', 'Lj2A146T27' => 'lonja', 'Lj2A256T102' => 'lonja', 'Lj2g0004219' => 'lja', 'Lj3A931G51' => 'lonja', 'Lj4A856T31' => 'lonja', 'Lj5g0000544' => 'lja', 'Lj5g0015082' => 'lja', 'Lj5g0020117' => 'lja', 'Lj5g0023023' => 'lja', 'Lj5g0026113' => 'lja', 'Lj6g0003960' => 'lja', 'Lj7C372T7' => 'lonja', 'Lj7P488T30' => 'lonja', 'Lsat_1_v5_gn_0_16941' => 'lsa', 'Lsat_1_v5_gn_1_50241' => 'lsa', 'Lsat_1_v5_gn_1_6081' => 'lsa', 'Lsat_1_v5_gn_3_137960' => 'lsa', 'Lsat_1_v5_gn_4_63860' => 'lsa', 'Lsat_1_v5_gn_6_70821' => 'lsa', 'Lsat_1_v5_gn_6_99141' => 'lsa', 'Lsat_1_v5_gn_9_41280' => 'lsa', 'Manes.01G001900' => 'mes', 'Manes.02G179100' => 'mes', 'Manes.02G179200' => 'mes', 'Manes.07G000300' => 'mes', 'Manes.07G124500' => 'mes', 'Manes.08G021500' => 'mes', 'Manes.08G132700' => 'mes', 'Manes.09G154300' => 'mes', 'Manes.10G055600' => 'mes', 'Manes.12G150200' => 'mes', 'Manes.16G085300' => 'mes', 'Manes.18G091600' => 'mes', 'Manes.18G091700' => 'mes', 'Mapoly0025s0112' => 'mpo', 'Mapoly0119s0048' => 'mpo', 'Mapoly0155s0008' => 'mpo', 'Mapoly0178s0023' => 'mpo', 'MBI02_g05770_MAGBIO' => 'mbi', 'MBI04_g12491_MAGBIO' => 'mbi', 'MBI04_g14396_MAGBIO' => 'mbi', 'MBI11_g09065_MAGBIO' => 'mbi', 'MBI12_g14793_MAGBIO' => 'mbi', 'MD02G1247700' => 'mdo', 'MD04G1221900' => 'mdo', 'MD05G1024400' => 'mdo', 'MD05G1024500' => 'mdo', 'MD05G1361500' => 'mdo', 'MD06G1127800' => 'mdo', 'MD07G1068800' => 'mdo', 'MD08G1071000' => 'mdo', 'MD10G1025100' => 'mdo', 'MD10G1025200' => 'mdo', 'MD10G1338800' => 'mdo', 'MD12G1018900' => 'mdo', 'MD12G1238000' => 'mdo', 'MD14G1016900' => 'mdo', 'MD14G1143600' => 'mdo', 'MD15G1050800' => 'mdo', 'Medtr1g060990' => 'mtr', 'Medtr1g081180' => 'mtr', 'Medtr1g098870' => 'mtr', 'Medtr1g098900' => 'mtr', 'Medtr1g492790' => 'mtr', 'Medtr2g026725' => 'mtr', 'Medtr6g035370' => 'mtr', 'Medtr7g114860' => 'mtr', 'MELO3C000615.2' => 'cme', 'MELO3C005815.2' => 'cme', 'MELO3C009440.2' => 'cme', 'MELO3C011683.2' => 'cme', 'MELO3C011694.2' => 'cme', 'MELO3C012365.2' => 'cme', 'MELO3C023266.2' => 'cme', 'MELO3C024673.2' => 'cme', 'MELO3C025528.2' => 'cme', 'MELO3C035616.2' => 'cme', 'Migut.A00081' => 'egut', 'Migut.A01055' => 'egut', 'Migut.B01075' => 'egut', 'Migut.B01081' => 'egut', 'Migut.H01112' => 'egut', 'Migut.J00979' => 'egut', 'Migut.L01404' => 'egut', 'Migut.L01760' => 'egut', 'Migut.N03228' => 'egut', 'MSTRG.11637' => 'ama', 'MSTRG.12228' => 'ama', 'MSTRG.1362' => 'ama', 'MSTRG.19234' => 'ama', 'MSTRG.23421' => 'ama', 'MSTRG.24205' => 'ama', 'MSTRG.24885' => 'ama', 'MSTRG.26649' => 'ama', 'MSTRG.5812' => 'ama', 'Nitab4.5_0000132g0140' => 'nta', 'Nitab4.5_0000140g0040' => 'nta', 'Nitab4.5_0000446g0220' => 'nta', 'Nitab4.5_0001296g0020' => 'nta', 'Nitab4.5_0001969g0020' => 'nta', 'Nitab4.5_0002064g0010' => 'nta', 'Nitab4.5_0002790g0010' => 'nta', 'Nitab4.5_0003142g0010' => 'nta', 'Nitab4.5_0004567g0010' => 'nta', 'Nitab4.5_0005517g0010' => 'nta', 'Nitab4.5_0005705g0010' => 'nta', 'Nitab4.5_0011433g0010' => 'nta', 'Nn1g02416' => 'nnu', 'Nn1g03171' => 'nnu', 'Nn1g06092' => 'nnu', 'Nn1g07513' => 'nnu', 'Nn2g14017' => 'nnu', 'Nn3g18000' => 'nnu', 'Nn3g18733' => 'nnu', 'Nn4g26560' => 'nnu', 'Nn5g28728' => 'nnu', 'Nn6g34144' => 'nnu', 'Nn6g35031' => 'nnu', 'Nn8g38750' => 'nnu', 'Nn8g40206' => 'nnu', 'Oeu011943.1' => 'oeu', 'Oeu014499.2' => 'oeu', 'Oeu018721.1' => 'oeu', 'Oeu033827.1' => 'oeu', 'Oeu033828.1' => 'oeu', 'Oeu036055.1' => 'oeu', 'Oeu036856.1' => 'oeu', 'Oeu037780.1' => 'oeu', 'Oeu038428.2' => 'oeu', 'Oeu039820.1' => 'oeu', 'Oeu046033.1' => 'oeu', 'Oeu047643.1' => 'oeu', 'Oeu051267.1' => 'oeu', 'Oeu052894.1' => 'oeu', 'Os02g0104500' => 'osa', 'Os02g0648300' => 'osa', 'Os04g0541100' => 'osa', 'Os10g0516500' => 'osa', 'Peaxi162Scf00025g02322' => 'pax', 'Peaxi162Scf00068g01410' => 'pax', 'Peaxi162Scf00101g00171' => 'pax', 'Peaxi162Scf00110g02110' => 'pax', 'Peaxi162Scf00664g00033' => 'pax', 'Peaxi162Scf00827g00065' => 'pax', 'Peaxi162Scf01294g00224' => 'pax', 'PGR004G0039' => 'pgr', 'PGR004G2628' => 'pgr', 'PGR031G3095' => 'pgr', 'PGR031G3831' => 'pgr', 'PGR042G2244' => 'pgr', 'PGR044G0157' => 'pgr', 'PGR044G1692' => 'pgr', 'PGR119G1804' => 'pgr', 'PGR142G0251' => 'pgr', 'PGSC0003DMG400002710' => 'stu', 'PGSC0003DMG400003964' => 'stu', 'PGSC0003DMG400013300' => 'stu', 'PGSC0003DMG400024107' => 'stu', 'PGSC0003DMG400028172' => 'stu', 'PGSC0003DMG400031419' => 'stu', 'Phvul.001G187000' => 'pvu', 'Phvul.004G095200' => 'pvu', 'Phvul.004G095400' => 'pvu', 'Phvul.006G100300' => 'pvu', 'Phvul.006G139200' => 'pvu', 'Phvul.007G079700' => 'pvu', 'Phvul.007G079800' => 'pvu', 'Phvul.007G104900' => 'pvu', 'Phvul.007G186700' => 'pvu', 'Phvul.007G222800' => 'pvu', 'Phvul.009G147500' => 'pvu', 'Potri.001G309100' => 'ptr', 'Potri.001G454500' => 'ptr', 'Potri.002G068400' => 'ptr', 'Potri.002G068600' => 'ptr', 'Potri.005G051700' => 'ptr', 'Potri.005G191900' => 'ptr', 'Potri.005G192000' => 'ptr', 'Potri.006G005300' => 'ptr', 'Potri.006G221400' => 'ptr', 'Potri.008G025600' => 'ptr', 'Potri.010G235000' => 'ptr', 'Potri.011G147400' => 'ptr', 'Potri.013G039100' => 'ptr', 'Potri.016G005900' => 'ptr', 'Potri.018G049301' => 'ptr', 'Potri.018G049500' => 'ptr', 'Potri.018G049700' => 'ptr', 'Potri.019G010200' => 'ptr', 'Pp3c15_19980' => 'ppa', 'Pp3c18_11190' => 'ppa', 'Pp3c18_11300' => 'ppa', 'Pp3c21_17550' => 'ppa', 'Pp3c21_18550' => 'ppa', 'Pp3c9_13630' => 'ppa', 'Prupe.1G405000' => 'ppe', 'Prupe.2G086500' => 'ppe', 'Prupe.4G003900' => 'ppe', 'Prupe.5G137600' => 'ppe', 'Prupe.6G162600' => 'ppe', 'Prupe.6G341000' => 'ppe', 'Prupe.7G116400' => 'ppe', 'Prupe.8G028700' => 'ppe', 'Prupe.8G028800' => 'ppe', 'Psat1g106400' => 'psa', 'Psat1g172720' => 'psa', 'Psat3g008000' => 'psa', 'Psat3g035400' => 'psa', 'Psat6g079400' => 'psa', 'Psat6g146880' => 'psa', 'Psat6g176560' => 'psa', 'Psat6g192880' => 'psa', 'Psat6g192960' => 'psa', 'PSO063G0167' => 'pso', 'PSO170G6830' => 'pso', 'PSO210G7025' => 'pso', 'PSO339G2179' => 'pso', 'PSO339G4901' => 'pso', 'PSO384G0867' => 'pso', 'PSO541G3753' => 'pso', 'PSO541G5805' => 'pso', 'PSO675G2022' => 'pso', 'PSO675G2211' => 'pso', 'PSO675G3992' => 'pso', 'PSO675G4901' => 'pso', 'PSO675G5112' => 'pso', 'PSO782G3080' => 'pso', 'PSO801G0564' => 'pso', 'QL02p023949' => 'qlo', 'QL02p023959' => 'qlo', 'QL02p026558' => 'qlo', 'QL03p024887' => 'qlo', 'QL04p041266' => 'qlo', 'QL05p067801' => 'qlo', 'QL06p040439' => 'qlo', 'QL06p051851' => 'qlo', 'QL07p040277' => 'qlo', 'RcHm_v2.0_Chr1g0333231' => 'rch', 'RcHm_v2.0_Chr2g0119181' => 'rch', 'RcHm_v2.0_Chr3g0451801' => 'rch', 'RcHm_v2.0_Chr3g0472271' => 'rch', 'RcHm_v2.0_Chr5g0000511' => 'rch', 'RcHm_v2.0_Chr6g0275491' => 'rch', 'RcHm_v2.0_Chr6g0275541' => 'rch', 'RcHm_v2.0_Chr6g0311751' => 'rch', 'RcHm_v2.0_Chr7g0188161' => 'rch', 'Rhsim03G0080600' => 'rsi', 'Rhsim10G0109000' => 'rsi', 'Rhsim10G0141900' => 'rsi', 'Sabra02G0053800' => 'sbr', 'Sabra02G0053900' => 'sbr', 'Sabra05G0045500' => 'sbr', 'Sabra05G0146600' => 'sbr', 'Sabra05G0146700' => 'sbr', 'Sabra06G0171000' => 'sbr', 'Sabra10G0182300' => 'sbr', 'Sabra11G0132500' => 'sbr', 'Sabra13G0036500' => 'sbr', 'Sabra16G0010700' => 'sbr', 'Sabra16G0194900' => 'sbr', 'Sabra16G0307400' => 'sbr', 'Sabra18G0046800' => 'sbr', 'Sabra19G0018700' => 'sbr', 'Sabra19G0023400' => 'sbr', 'SalBow4G2903' => 'sbo', 'SalBow5G4730' => 'sbo', 'Sc02g0001110' => 'sci', 'Sc02g0004070' => 'sci', 'Sc09g0003850' => 'sci', 'Sc20g0003560' => 'sci', 'Sc20g0006100' => 'sci', 'Sc24g0000410' => 'sci', 'Sed0000339' => 'sed', 'Sed0006791' => 'sed', 'Sed0009651' => 'sed', 'Sed0009820' => 'sed', 'Sed0010292' => 'sed', 'Sed0011751' => 'sed', 'Sed0012387' => 'sed', 'Sed0014016' => 'sed', 'Sed0015540' => 'sed', 'Sed0020643' => 'sed', 'Sed0022401' => 'sed', 'Sed0022435' => 'sed', 'Sed0025012' => 'sed', 'SEGI_00019' => 'sgi', 'SEGI_02452' => 'sgi', 'SEGI_03384' => 'sgi', 'SEGI_03779' => 'sgi', 'SEGI_06021' => 'sgi', 'SEGI_06190' => 'sgi', 'SEGI_06928' => 'sgi', 'SEGI_08458' => 'sgi', 'SEGI_08827' => 'sgi', 'SEGI_09008' => 'sgi', 'SEGI_21270' => 'sgi', 'SEGI_22956' => 'sgi', 'SEGI_25844' => 'sgi', 'SEGI_28336' => 'sgi', 'SGA_v2.0_scaffold137G35104' => 'sas', 'SGA_v2.0_scaffold184G39931' => 'sas', 'SGA_v2.0_scaffold19G08656' => 'sas', 'SGA_v2.0_scaffold20G09169' => 'sas', 'SGA_v2.0_scaffold35G14094' => 'sas', 'SGA_v2.0_scaffold40G15390' => 'sas', 'SGA_v2.0_scaffold48G17962' => 'sas', 'SGA_v2.0_scaffold75G24793' => 'sas', 'SHI20352' => 'shi', 'SHI21276' => 'shi', 'SHI24434' => 'shi', 'SMO118G0085' => 'smo', 'SMO137G0027' => 'smo', 'SMO347G0082' => 'smo', 'SMO351G0212' => 'smo', 'Solyc04g071360.4' => 'sly', 'Solyc09g009250.3' => 'sly', 'Solyc11g005380.2' => 'sly', 'Solyc11g012720.2' => 'sly', 'Solyc12g056510.3' => 'sly', 'Sopen04g027330' => 'spe', 'Sopen09g003980' => 'spe', 'Sopen10g033040' => 'spe', 'Sopen11g001390' => 'spe', 'Sopen11g007460' => 'spe', 'Sopen12g029100' => 'spe', 'Sp1g28690' => 'spa', 'Sp2g12370' => 'spa', 'Sp2g20210' => 'spa', 'Sp5g32000' => 'spa', 'Sp5g32010' => 'spa', 'Sp6g39040' => 'spa', 'TAR362G1129' => 'tar', 'TAR365G0141' => 'tar', 'TAR369G0986' => 'tar', 'TAR369G1131' => 'tar', 'TAR374G1134' => 'tar', 'TAR381G0236' => 'tar', 'TAR624G0045' => 'tar', 'TAR625G0962' => 'tar', 'TAR633G0324' => 'tar', 'TAR636G2577' => 'tar', 'TAR636G3043' => 'tar', 'TAR636G3572' => 'tar', 'THA.LOC104798378' => 'tha', 'THA.LOC104800035' => 'tha', 'THA.LOC104806076' => 'tha', 'THA.LOC104807905' => 'tha', 'THA.LOC104809126' => 'tha', 'THA.LOC104810256' => 'tha', 'THA.LOC104812041' => 'tha', 'THA.LOC104812042' => 'tha', 'THA.LOC104813073' => 'tha', 'THA.LOC104813709' => 'tha', 'THA.LOC104813710' => 'tha', 'THA.LOC104815563' => 'tha', 'THA.LOC104816368' => 'tha', 'THA.LOC104818638' => 'tha', 'THA.LOC104826932' => 'tha', 'Thecc.01G120700' => 'tca', 'Thecc.03G213400' => 'tca', 'Thecc.05G081700' => 'tca', 'Thecc.05G287000' => 'tca', 'Thecc.06G241000' => 'tca', 'Thecc.08G151000' => 'tca', 'Thecc.08G151400' => 'tca', 'Thecc.09G062900' => 'tca', 'Thecc.10G110100' => 'tca', 'Thhalv10000907m.g' => 'esa', 'Thhalv10003841m.g' => 'esa', 'Thhalv10007000m.g' => 'esa', 'Thhalv10013048m.g' => 'esa', 'Thhalv10018297m.g' => 'esa', 'Thhalv10018336m.g' => 'esa', 'TPR.G10242' => 'tpr', 'TPR.G10584' => 'tpr', 'TPR.G24925' => 'tpr', 'TPR.G24927' => 'tpr', 'TPR.G2529' => 'tpr', 'TPR.G30945' => 'tpr', 'TPR.G36631' => 'tpr', 'TPR.G36675' => 'tpr', 'TPR.G5652' => 'tpr', 'TPR.G7009' => 'tpr', 'TWI15G1212' => 'twi', 'TWI23G0319' => 'twi', 'TWI32G0527' => 'twi', 'TWI32G1009' => 'twi', 'TWI34G0306' => 'twi', 'TWI34G0761' => 'twi', 'TWI56G0041' => 'twi', 'TWI60G0544' => 'twi', 'TWI60G1365' => 'twi', 'TWI60G1467' => 'twi', 'TWI63G1038' => 'twi', 'TWI63G1041' => 'twi', 'TWI74G1454' => 'twi', 'TWI75G0520' => 'twi', 'TWI77G0340' => 'twi', 'TWI79G0727' => 'twi', 'TWI81G0624' => 'twi', 'unitig_0.g2106' => 'ugi', 'unitig_0.g2107' => 'ugi', 'unitig_32.g11269' => 'ugi', 'unitig_32.g11270' => 'ugi', 'unitig_32.g11528' => 'ugi', 'unitig_4.g30330' => 'ugi', 'unitig_578.g15767' => 'ugi', 'unitig_746.g26771' => 'ugi', 'unitig_746.g26772' => 'ugi', 'unitig_746.g26773' => 'ugi', 'unitig_747.g21510' => 'ugi', 'unitig_747.g21511' => 'ugi', 'unitig_748.g7564' => 'ugi', 'unitig_748.g7702' => 'ugi', 'unitig_748.g8238' => 'ugi', 'unitig_8.g4141' => 'ugi', 'unitig_8.g4725' => 'ugi', 'unitig_82.g27047' => 'ugi', 'unitig_82.g27048' => 'ugi', 'unitig_82.g27049' => 'ugi', 'unitig_899.g14707' => 'ugi', 'unitig_899.g15207' => 'ugi', 'vmacro01451' => 'vma', 'vmacro05242' => 'vma', 'vmacro07359' => 'vma', 'vmacro12826' => 'vma', 'vmacro15731' => 'vma', 'VMungo0464G0919' => 'vmu', 'VMungo0464G1744' => 'vmu', 'VMungo0464G1913' => 'vmu', 'VMungo0540G0119' => 'vmu', 'VMungo0540G2363' => 'vmu', 'VMungo0720G0737' => 'vmu', 'VMungo0720G0816' => 'vmu', 'VMungo0720G0886' => 'vmu', 'VMungo0720G1455' => 'vmu', 'VMungo0720G1559' => 'vmu', 'VMungo0720G2439' => 'vmu', 'VMungo1080G1607' => 'vmu', 'VMungo1127G0092' => 'vmu', 'VMungo1309G1011' => 'vmu', 'VMungo1383G1393' => 'vmu', 'Zm00001eb000880' => 'zma', 'Zm00001eb043580' => 'zma', 'Zm00001eb075250' => 'zma', 'Zm00001eb186200' => 'zma', 'Zm00001eb209880' => 'zma', 'Zm00001eb220250' => 'zma', 'Zm00001eb229400' => 'zma', 'Zm00001eb248900' => 'zma', 'Zm00001eb427630' => 'zma' ) $gf_id = 'HOM05D000547' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000547' ) $data_identifier = 'HOM05D000547' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 7, 'aox' => (int) 6, 'arhy' => (int) 22, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 13, 'bca' => (int) 27, 'bol' => (int) 16, 'bra' => (int) 14, 'can' => (int) 6, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 5, 'cde' => (int) 8, 'cfa' => (int) 8, 'ccl' => (int) 9, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 11, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 15, 'dzi' => (int) 20, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 35, 'fve' => (int) 9, 'gma' => (int) 22, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 7, 'sun' => (int) 6, 'lal' => (int) 19, 'lja' => (int) 10, 'lonja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 13, 'mpo' => (int) 4, 'mbi' => (int) 5, 'mdo' => (int) 16, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 9, 'nta' => (int) 12, 'nnu' => (int) 13, 'oeu' => (int) 14, 'osa' => (int) 4, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 6, 'pvu' => (int) 11, 'ptr' => (int) 18, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 9, 'pso' => (int) 15, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 3, 'sbr' => (int) 15, 'sbo' => (int) 2, 'sci' => (int) 6, 'sed' => (int) 13, 'sgi' => (int) 14, 'sas' => (int) 8, 'shi' => (int) 3, 'smo' => (int) 4, 'sly' => (int) 5, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 15, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 10, 'twi' => (int) 17, 'ugi' => (int) 22, 'vma' => (int) 5, 'vmu' => (int) 15, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427630' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1